e7.proteins.fa.gz
|
All protein sequences covered in eggNOG 7 |
– |
e7.og_fasta_sequences.tar
|
OG FASTA Files |
– |
e7.og_info_kegg_go.tsv.gz
|
OG info file. |
– |
Example Data & Fields
OG name |
protein cluster |
taxonomic level |
# proteins |
# species |
List of proteins |
KEGG KO terms |
KEGG KO symbols |
GO slim terms |
Oxidored_nitro@131567|u-6 |
Oxidored_nitro |
131567 |
574 |
295 |
taxid1.seq2,taxi1.seq2,(...) |
K02586|23.87;K02588|3.48;(...) |
nifD|23.87;nifH|3.48;(...) |
GO:0071941|14.11;GO:0016192|0.35; (...) |
UNK.278C@194|E-3 |
UNK.278C |
194 |
2 |
2 |
360107.CHAB381_1185,824.CGRAC_0800 |
|
|
|
|
e7.protein_families.tsv.gz
|
Protein family info file. |
– |
Example Data & Fields
protein family name |
# proteins |
# species |
# OGs detected |
list of proteins |
UNK.278C |
5 |
3 |
3 |
360107.CHAB381_1185,824.CGRAC_0800,1754190.A0A1Y2AD84,360107.CHAB381_1205,360107.CHAB381_1203 |
UNK.47DV |
6 |
6 |
1 |
32049.SYNPCC7002_A1726,1306174.GCA_000719025_01057,454133.NIES208_15605,195250.GCA_000332275_01470,374981.AWQ21_10540,111781.Lepto7376_1496 |
|
e7.clu2ogs.tsv.gz
|
OGs per protein family. |
– |
Example Data & Fields
name |
# Ogs in protein cluster |
list of Ogs in protein cluster |
120_Rick_ant |
3 |
114292|M-6,33988|A-1,780|G-3 |
12TM_1 |
3 |
131567|A-1,2157|V-5,2157|W-5 |
|
e7.taxid_info.tsv.gz
|
Taxonomic information of genomes |
– |
Example Data & Fields
New_Taxid |
Old_Taxid |
Sci_Name |
Rank |
Named_Lineage |
Taxid_Lineage |
2610897 |
2610897 |
unclassified Hydrogenophaga |
no rank |
root,cellular organisms,Bacteria,Pseudomonadati,Pseudomonadota,Betaproteobacteria,Burkholderiales,Comamonadaceae,Hydrogenophaga,unclassified Hydrogenophaga |
1,131567,2,3379134,1224,28216,80840,80864,47420,2610897 |
|
e7.trees.tsv.gz
|
Protein family phylogenetic trees |
– |
Example Data & Fields
protein family name |
# proteins |
tree size (bytes) |
tree (Newick) |
DUF2614 |
578 |
55476 |
(((979226.GCA_000515335_01545:0.23466[&&NHX:lca=979226],1816691.GCA_900169535_02313:0.34631[&&NHX:lca=1816691])... |
DUF4158 |
1870 |
258971 |
(((1225341.GCA_001310615_05350:1.05225[&&NHX:gop=3?:lca=1225341:out=t],(((((((985867.GCA_000190415_00004:0.05015[&&NHX:gop=3?:lca=985867],... |
|